Suchergebnisse

GAGA is a nuclear protein encoded by the Trithorax-like gene in Drosophila that is expressed in at least two isoforms generated by alternative splicing. By means of its specific interaction with DNA, GAGA has been involved in several nuclear transactions including regulation of gene expression. Here we have studied the GAGA519 isoform as a transcription factor. In vitro, the transactivation domain has been assigned to the 93 C- terminal residues that correspond to a glutamine-rich domain (Q-domain). It presents an internal modular structure and acts independently of the rest of the protein. In vivo, in Drosophila SL2 cells, Q-domain can transactivate reporter genes either in the form of GAGA or Gal4BD-Q fusions, whereas a GAGA mutant deleted of the Q-domain cannot. Our results give support to the notion that GAGA can function as a transcription activating factor. ; This work was supported by Spanish Dirección General de Enzeñanza Superior Grant PB96-0812, European Union Grant FMRX-CT97-0109, and Comissió Interdepartamental de Recerca i InnovacióTecnològica (CIRIT) of the Generalitat de Catalunya Grant SGR97-55. This work was carried out in the context of the Centre de Referència en Biotecnologia of the CIRIT of the Generalitat de Catalunya ; Peer Reviewed

Chromatin is known to undergo extensive remodeling during nuclear reprogramming. However, the factors and mechanisms involved in this remodeling are still poorly understood and current experimental approaches to study it are not best suited for molecular and genetic analyses. Here we report on the use of Drosophila preblastodermic embryo extracts (DREX) in chromatin remodeling experiments. Our results show that incubation of somatic nuclei in DREX induces changes in chromatin organization similar to those associated with nuclear reprogramming, such as rapid binding of the germline specific linker histone dBigH1 variant to somatic chromatin, heterochromatin reorganization, changes in the epigenetic state of chromatin, and nuclear lamin disassembly. These results raise the possibility of using the powerful tools of Drosophila genetics for the analysis of chromatin changes associated with this essential process. ; This work was supported by grants from MINECO (BFU2015-65082-P), the Generalitat de Catalunya (SGR2014-204), and the European Community FEDER program. This work was carried out within the framework of the "Centre de Referència en Biotecnologia" of the Generalitat de Catalunya. EŠ acknowledges receipt of a NEWFELPRO Fellowship of the Croatian Government and Ministry of Science and Education within EU FP7 Programme framework. ; Peer reviewed

DNA recombination is a universal biological event responsible both for the generation of genetic diversity and for the maintenance of genome integrity. A four-way DNA junction, also termed Holliday junction, is the key intermediate in nearly all recombination processes. This junction is the substrate of recombination enzymes that promote branch migration or catalyze its resolution. We have determined the crystal structure of a four-way DNA junction by multiwavelength anomalous diffraction, and refined it to 2.16 Å resolution. The structure has two-fold symmetry, with pairwise stacking of the double-helical arms, which form two continuous B-DNA helices that run antiparallel, cross in a right-handed way, and contain two G-A mismatches. The exchanging backbones form a compact structure with strong van der Waals contacts and hydrogen bonds, implying that a conformational change must occur for the junction to branch-migrate or isomerize. At the branch point, two phosphate groups from one helix occupy the major groove of the other one, establishing sequence-specific hydrogen bonds. These interactions, together with different stacking energies and steric hindrances, explain the preference for a particular junction stacked conformer. ; This work was supported by grants from the Ministerio de Educación y Cultura of Spain, the Generalitat de Catalunya, the Centre de Referència en Biotecnologia and the European Union. ; Peer Reviewed