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12 pages, 5 figures, 4 tables, 1 video, supplementary material https://dx.doi.org/10.1038/s41598-018-32089-8 ; Marine cabled video-observatories allow the non-destructive sampling of species at frequencies and durations that have never been attained before. Nevertheless, the lack of appropriate methods to automatically process video imagery limits this technology for the purposes of ecosystem monitoring. Automation is a prerequisite to deal with the huge quantities of video footage captured by cameras, which can then transform these devices into true autonomous sensors. In this study, we have developed a novel methodology that is based on genetic programming for content-based image analysis. Our aim was to capture the temporal dynamics of fish abundance. We processed more than 20,000 images that were acquired in a challenging real-world coastal scenario at the OBSEA-EMSO testing-site. The images were collected at 30-min. frequency, continuously for two years, over day and night. The highly variable environmental conditions allowed us to test the effectiveness of our approach under changing light radiation, water turbidity, background confusion, and bio-fouling growth on the camera housing. The automated recognition results were highly correlated with the manual counts and they were highly reliable when used to track fish variations at different hourly, daily, and monthly time scales. In addition, our methodology could be easily transferred to other cabled video-observatories ; The Research leading to these results has received funding from the European Union Seventh Framework Programme (FP7/2013-2017) under the grant agreement n° 312463, FixO3, through the TNA project FISHAUT (grant agreement n° FC-01) for accessing the OBSEA data ; Peer Reviewed

Deep-sea ecological monitoring is increasingly recognized as indispensable for the comprehension of the largest biome on Earth, but at the same time it is subjected to growing human impacts for the exploitation of biotic and abiotic resources. Here, we present the Naples Ecological REsearch (NEREA) stand-alone observatory concept (NEREA-fix), an integrated observatory with a modular, adaptive structure, characterized by a multiparametric video-platform to be deployed in the Dohrn canyon (Gulf of Naples, Tyrrhenian Sea) at ca. 650 m depth. The observatory integrates a seabed platform with optoacoustic and oceanographic/geochemical sensors connected to a surface transmission buoy, plus a mooring line (also equipped with depth-staged environmental sensors). This reinforced high-frequency and long-lasting ecological monitoring will integrate the historical data conducted over 40 years for the Long-Term Ecological Research (LTER) at the station "Mare Chiara", and ongoing vessel-assisted plankton (and future environmental DNA-eDNA) sampling. NEREA aims at expanding the observational capacity in a key area of the Mediterranean Sea, representing a first step towards the establishment of a bentho-pelagic network to enforce an end-to-end transdisciplinary approach for the monitoring of marine ecosystems across a wide range of animal sizes (from bacteria to megafauna). ; This research was funded by PON "Iniziative in supporto al consolidamento e potenziamento dell'infrastruttura EMSO e delle sue attività (InSEA)" - European Union - Italian Ministry of University and Research, grant number PIR01_00030. ; Peer Reviewed ; Postprint (published version)

10 pages, 5 figures, 1 table ; Deep-sea ecosystems of the Iberian margin have been widely impacted over the past decades, but the limited knowledge on their biodiversity and functioning limits our ability to contribute to their conservation. So far, in the Gulf of Cadiz, research has mostly been focused on megabenthic assemblages associated to mud volcanoes. However, several other geomorphological structures have remained widely unexplored. Here, by means of a quantitative analysis of 17 video transects conducted between 220 and 980 m depth, we investigated megabenthic assemblages associated to canyons, contouritic channels, contouritic furrows and open slopes. We report the presence of 8 different assemblages, segregated as a result of the different substrates and geomorphologic features. Megabenthic assemblages on hard substrates were characterized by mono or multispecific sponge assemblages. Soft bottoms hosted crinoid beds, pennatulacean meadows and fields of the gorgonian Radicipes gracilis. These results highlight the high diversity of megabenthic assemblages in deep-sea ecosystems of the Gulf of Cadiz and suggest that most of the geomorphological features that remained so far unexplored represent vulnerable marine ecosystems deserving protection and inclusion in future management plans ; The present study was developed in the framework of the Tecnoterra (ICM-CSIC/UPC) Associate Unit and the following project activities, funded by the Spanish Government MOWER (CTM 2012-39599-C03), FAUCES (CTM2015-65461-C2-1-R) and RESBIO (TEC2017-87861-R), plus the ARIM (Autonomous Robotic sea-floor Infrastructure for benthopelagic Monitoring) funded by the MartTERA ERA-Net Cofound and by the project PRIN GLIDE (MUR-IT). [.] This work acknowledges the 'Severo Ochoa Centre of Excellence' accreditation (CEX2019-000928-S). Francescangeli M. was funded by the European Project ERASMUS grant 2017 ; Peer reviewed

Benthic habitats of the deep Mediterranean Sea and the biodiversity they host are increasingly jeopardized by increasing human pressures, both direct and indirect, which encompass fisheries, chemical and acoustic pollution, littering, oil and gas exploration and production and marine infrastructures (i.e., cable and pipeline laying), and bioprospecting. To this, is added the pervasive and growing effects of human-induced perturbations of the climate system. International frameworks provide foundations for the protection of deep-sea ecosystems, but the lack of standardized criteria for the identification of areas deserving protection, insufficient legislative instruments and poor implementation hinder an efficient set up in practical terms. Here, we discuss the international legal frameworks and management measures in relation to the status of habitats and key species in the deep Mediterranean Basin. By comparing the results of a multi-criteria decision analysis (MCDA) and of expert evaluation (EE), we identify priority deep-sea areas for conservation and select five criteria for the designation of future protected areas in the deep Mediterranean Sea. Our results indicate that areas (1) with high ecological relevance (e.g., hosting endemic and locally endangered species and rare habitats),(2) ensuring shelf-slope connectivity (e.g., submarine canyons), and (3) subject to current and foreseeable intense anthropogenic impacts, should be prioritized for conservation. The results presented here provide an ecosystem-based conservation strategy for designating priority areas for protection in the deep Mediterranean Sea. ; peer-reviewed

WOS:000683743800001 ; International audience ; Benthic habitats of the deep Mediterranean Sea and the biodiversity they host are increasingly jeopardized by increasing human pressures, both direct and indirect, which encompass fisheries, chemical and acoustic pollution, littering, oil and gas exploration and production and marine infrastructures (i.e., cable and pipeline laying), and bioprospecting. To this, is added the pervasive and growing effects of human-induced perturbations of the climate system. International frameworks provide foundations for the protection of deep-sea ecosystems, but the lack of standardized criteria for the identification of areas deserving protection, insufficient legislative instruments and poor implementation hinder an efficient set up in practical terms. Here, we discuss the international legal frameworks and management measures in relation to the status of habitats and key species in the deep Mediterranean Basin. By comparing the results of a multi-criteria decision analysis (MCDA) and of expert evaluation (EE), we identify priority deep-sea areas for conservation and select five criteria for the designation of future protected areas in the deep Mediterranean Sea. Our results indicate that areas (1) with high ecological relevance (e.g., hosting endemic and locally endangered species and rare habitats),(2) ensuring shelf-slope connectivity (e.g., submarine canyons), and (3) subject to current and foreseeable intense anthropogenic impacts, should be prioritized for conservation. The results presented here provide an ecosystem-based conservation strategy for designating priority areas for protection in the deep Mediterranean Sea.

WOS:000683743800001 ; International audience ; Benthic habitats of the deep Mediterranean Sea and the biodiversity they host are increasingly jeopardized by increasing human pressures, both direct and indirect, which encompass fisheries, chemical and acoustic pollution, littering, oil and gas exploration and production and marine infrastructures (i.e., cable and pipeline laying), and bioprospecting. To this, is added the pervasive and growing effects of human-induced perturbations of the climate system. International frameworks provide foundations for the protection of deep-sea ecosystems, but the lack of standardized criteria for the identification of areas deserving protection, insufficient legislative instruments and poor implementation hinder an efficient set up in practical terms. Here, we discuss the international legal frameworks and management measures in relation to the status of habitats and key species in the deep Mediterranean Basin. By comparing the results of a multi-criteria decision analysis (MCDA) and of expert evaluation (EE), we identify priority deep-sea areas for conservation and select five criteria for the designation of future protected areas in the deep Mediterranean Sea. Our results indicate that areas (1) with high ecological relevance (e.g., hosting endemic and locally endangered species and rare habitats),(2) ensuring shelf-slope connectivity (e.g., submarine canyons), and (3) subject to current and foreseeable intense anthropogenic impacts, should be prioritized for conservation. The results presented here provide an ecosystem-based conservation strategy for designating priority areas for protection in the deep Mediterranean Sea.

16 pages, 5 figures, 4 tables, supplementary material https://www.frontiersin.org/articles/10.3389/fmars.2021.698890/full#supplementary-material.-- Data Availability Statement: The original contributions presented in the study are included in the article/Supplementary Material, further inquiries can be directed to the corresponding author ; This study was supported by the DG ENV project IDEM (Implementation of the MSFD to the Deep Mediterranean Sea; contract EU No. 11.0661/2017/750680/SUB/EN V.C2). MC and QG-B acknowledge support from Generalitat de Catalunya autonomous government through its funding scheme to excellence research groups (Grant 2017 SGR 315) ; With the institutional support of the'Severo OchoaCentre of Excellence' accreditation (CEX2019-000928-S) ; Peer reviewed

© The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Fanelli, E., Bianchelli, S., Foglini, F., Canals, M., Castellan, G., Guell-Bujons, Q., Galil, B., Goren, M., Evans, J., Fabri, M.-C., Vaz, S., Ciuffardi, T., Schembri, P. J., Angeletti, L., Taviani, M., & Danovaro, R. Identifying priorities for the protection of deep Mediterranean Sea ecosystems through an integrated approach. Frontiers in Marine Science, 8, (2021): 698890, https://doi.org/10.3389/fmars.2021.698890. ; Benthic habitats of the deep Mediterranean Sea and the biodiversity they host are increasingly jeopardized by increasing human pressures, both direct and indirect, which encompass fisheries, chemical and acoustic pollution, littering, oil and gas exploration and production and marine infrastructures (i.e., cable and pipeline laying), and bioprospecting. To this, is added the pervasive and growing effects of human-induced perturbations of the climate system. International frameworks provide foundations for the protection of deep-sea ecosystems, but the lack of standardized criteria for the identification of areas deserving protection, insufficient legislative instruments and poor implementation hinder an efficient set up in practical terms. Here, we discuss the international legal frameworks and management measures in relation to the status of habitats and key species in the deep Mediterranean Basin. By comparing the results of a multi-criteria decision analysis (MCDA) and of expert evaluation (EE), we identify priority deep-sea areas for conservation and select five criteria for the designation of future protected areas in the deep Mediterranean Sea. Our results indicate that areas (1) with high ecological relevance (e.g., hosting endemic and locally endangered species and rare habitats),(2) ensuring shelf-slope connectivity (e.g., submarine canyons), and (3) subject to current and foreseeable intense anthropogenic impacts, should be prioritized ...

Summary based on the state-of-the-art for the deep Mediterranean Sea with the final aim of identifying knowledge and gaps, descriptor by descriptor (such as lack of data, indicators, thresholds). This document is an analysis of all scientific publications, national and international reports and grey literature available on the implementation of the MSFD to the deep Mediterranean Sea. ; N/A