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This project has received funding from the European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 746602. GA and SB have been partly funded by Gemini Wind park and the NWO (project ALWPP.2017.003). ; Understanding why animals move as they do when searching for resources is a central question in ecology, and a prerequisite for the development of predictive process-based models for conservation and management. Many species are central-place foragers (CPF). While several models for CPFs have been proposed, they often assume well-defined return rules to the focal point (like breeding). For some CPFs, however, the decisions to return to central sites are governed by multiple interactions between environmental and physiological factors. We present AgentSeal, a behaviour- and physiology-based, spatially explicit, agent-based model. We use harbour seals, a marine CPF, as a case study and focus on individuals outside their breeding and moulting seasons to capture general fine- and large-scale movements and drivers behind CPF. We model movement decisions based on optimal foraging strategy, cognitive and physiological processes in a realistic landscape, coupled with realistic prey distribution and tuned to a range of behavioural and physiological patterns observed at different scales and levels of organisation (pattern-orientated modelling, POM). The model can reproduce energetic, movement and other behavioural patterns such as net energy balance, at-sea and on land site fidelity, daily activity budgets and trip extents. The model reveals the crucial elements needed to model return-trips of CPFs including movement characteristics that vary as a function of local environmental conditions, cognitive mapping of foraging areas as points of attraction in subsequent foraging trips, and physiological requirements defining switches between resting and foraging. We discuss potential applications and extensions of the model, including investigations of fundamental questions in foraging ecology: how spatial distribution and aggregation of resources affect movement of marine CPFs; what are the main drivers behind their at-sea site-fidelity to foraging patches? We also discuss applied objectives such as improving our understanding of population-level consequences of anthropogenic disturbances and ultimately evolving AgentSeal into a practical management tool. ; Publisher PDF ; Peer reviewed

Acknowledgement This project has received funding from the European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 746602. GA and SB have been partly funded by Gemini Wind park and the NWO (project ALWPP.2017.003). We would like to thank J. Grecian, D. Thomson, M. Fedak, M. Carter, D. Russell, A. Hall, J. Ransijn, H. Vance and M. Civil for help in model design. ; Peer reviewed ; Publisher PDF

An unprecedented 85 harbour porpoises stranded freshly dead along approximately 100 km of Danish coastline from 7-15 April, 2005. This total is considerably above the mean weekly stranding rate for the whole of Denmark, both for any time of year, 1.23 animals/week (ranging from 0 to 20 during 2003-2008, excluding April 2005), and specifically in April, 0.65 animals/week (0 to 4, same period). Bycatch was established as the cause of death for most of the individuals through typical indications of fisheries interactions, including net markings in the skin and around the flippers, and loss of tail flukes. Local fishermen confirmed unusually large porpoise bycatch in nets set for lumpfish (Cyclopterus lumpus) and the strandings were attributed to an early lumpfish season. However, lumpfish catches for 2005 were not unusual in terms of season onset, peak or total catch, when compared to 2003-2008. Consequently, human activity was combined with environmental factors and the variation in Danish fisheries landings (determined through a principal component analysis) in a two-part statistical model to assess the correlation of these factors with both the presence of fresh strandings and the numbers of strandings on the Danish west coast. The final statistical model (which was forward selected using Akaike information criterion; AIC) indicated that naval presence is correlated with higher rates of porpoise strandings, particularly in combination with certain fisheries, although it is not correlated with the actual presence of strandings. Military vessels from various countries were confirmed in the area from the 7th April, en route to the largest naval exercise in Danish waters to date (Loyal Mariner 2005, 11-28 April). Although sonar usage cannot be confirmed, it is likely that ships were testing various equipment prior to the main exercise. Thus naval activity cannot be ruled out as a possible contributing factor.