Review of quantitative assessment of risk reduction options applied in the EFSA outputs on biological hazards, in support of a guidance document of the EFSA Panel on Plant Health
In: EFSA supporting publications, Band 9, Heft 6
ISSN: 2397-8325
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In: EFSA supporting publications, Band 9, Heft 6
ISSN: 2397-8325
Organic farming adoption is on the rise in many countries, due to the increased awareness of farmers, citizens, governments and other stakeholders of its more sustainable nature. Various studies have investigated the socio-economic drivers (e.g., consumer demand, support measures, agricultural policies) of organic farming adoption, but less attention has been paid to whether biogeographic factors could also be associated with variation in rates of organically managed farms in certain regions within countries. We investigate whether biogeographic factors are associated with variation in the proportion of land under organic farming in French departments. The proportion of land under organic farming increased with decreasing latitude and increasing department area. Non-significant factors were number of plant taxa, proportion of Natura 2000 protected areas, connectivity, longitude, altitude and department population. These results were robust to controlling for spatial autocorrelation. Larger and southern French departments tend to have a greater adoption of organic farming, possibly because of the more extensive nature of agriculture in such regions. Biogeographic factors have been relatively neglected in investigations of the drivers of organic farming adoption, but may have an important explanatory value.
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Plant diseases threaten both food security and the botanical diversity of natural ecosystems. Substantial research effort is focused on pathogen detection and control, with detailed risk management available for many plant diseases. Risk can be assessed using analytical techniques that account for disease pressure both spatially and temporally. We suggest that such technical assessments of disease risk may not provide an adequate guide to the strategies undertaken by growers and government to manage plant disease. Instead, risk-management strategies need to account more fully for intuitive and normative responses that act to balance conflicting interests between stakeholder organizations concerned with plant diseases within the managed and natural environments. Modes of effective engagement between policy makers and stakeholders are explored in the paper, together with an assessment of such engagement in two case studies of contemporary non-indigenous diseases in one food and in one non-food sector. Finally, a model is proposed for greater integration of stakeholders in policy decisions.
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In: EFSA journal, Band 14
ISSN: 1831-4732
Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of Arceuthobium spp. (non-EU), a well-defined and distinguishable group of parasitic plant species of the family Viscaceae, also known as dwarf mistletoes. These are flowering plants parasitising a wide range of conifers of the families Pinaceae and Cupressaceae. Arceuthobium species (non-EU) are regulated in Council Directive 2000/29/EC (Annex IAI) as harmful organisms whose introduction into the EU is banned. Many Arceuthobium species are recognised, with most dwarf mistletoes native in the New World, and north-western Mexico and the western USA as the centre of diversity for the genus. Only two Arceuthobium species are native (and reported to be present) in the EU (Arceuthobium azoricum and Arceuthobium oxycedrum), which are thus not part of this pest categorisation. Hosts of non-EU dwarf mistletoes include species of the genera Abies, Cupressus, Juniperus, Larix, Picea, Pinus, Pseudotsuga and Tsuga. Most Arceuthobium spp. can parasitise more than one species of conifer host. Dwarf mistletoes could enter the EU via host plants for planting and cut branches, but these pathways are closed. They could establish in the EU, as hosts are widespread and climatic conditions are favourable. They would be able to spread following establishment by human movement of host plants for planting and cut branches, as well as natural spread. Should non-EU dwarf mistletoes be introduced in the EU, impacts can be expected on coniferous woodlands, plantations, ornamental trees and nurseries. The main uncertainties concern (i) the precise distribution and host range of the individual Arceuthobium spp. and (ii) the level of susceptibility of conifers native to Europe. For Arceuthobium spp. (non-EU) as a group of organisms, the criteria assessed by the Panel for consideration as a potential quarantine pest are met, while, for regulated non-quarantine pests, the criterion on the pest presence in the EU is not met.
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Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of Gymnosporangium spp. (non-EU), a well-defined and distinguishable group of fungal plant pathogens of the family Pucciniaceae affecting woody species. Many different Gymnosporangium species are recognised, of which at least 14 species are considered not to be native in the European Union. All the non-EU Gymnosporangium species are not known to be present in the EU and are regulated in Council Directive 2000/29/EC (Annex IAI) as harmful organisms whose introduction into the EU is banned. Gymnosporangium spp. are biotrophic obligate plant pathogens. These rust fungi are heteroecious as they require Juniperus, Libocedrus, Callitropsis, Chamaecyparis or Cupressus (telial hosts) and rosaceous plants of subfamily Pomoideae (aecial hosts) to complete their life cycle. The pathogens could enter the EU via host plants for planting (including artificially dwarfed woody plants) and cut branches. They could establish in the EU, as climatic conditions are favourable and hosts are common. They would be able to spread following establishment by movement of host plants for planting and cut branches, as well as by natural dispersal. Should Gymnosporangium spp. (non-EU) be introduced in the EU, impacts can be expected in orchards, ornamental trees and nurseries. On telial hosts, these pathogens cause galls on stems, twigs and branches, and fusiform swellings on stems. Foliar infections on aecial hosts may lead to severe defoliations. The main knowledge gap concerns the limited available information on the biology, distribution range and impact of several non-EU Gymnosporangium spp. The criteria assessed by the Panel for consideration of Gymnosporangium spp. (non-EU) as potential quarantine pests are met, while, for regulated non-quarantine pests, the criterion on the pest presence in the EU is not met.
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Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of Cronartium spp. (non-EU), a well-defined and distinguishable group of fungal pathogens of the family Cronartiaceae. There are at least 40 species described within the Cronartium genus, of which two are considered native to the EU (C. gentianeum and C. pini) and one has been introduced in the 19th century (C. ribicola) and is now widespread in the EU – these three species are thus not part of this pest categorisation. In addition, the non-EU C. harknessii, C. kurilense and C. sahoanum were already dealt with in a previous pest categorisation. All the non-EU Cronartium species are not known to be present in the EU and are regulated in Council Directive 2000/29/EC (Annex IAI) as harmful organisms whose introduction into the EU is banned. Cronartium spp. are biotrophic obligate plant pathogens. Many of the North American Cronartium species alternate between the aecial host Pinus spp. and telial hosts of various dicotyledonous plants. C. conigenum, C. orientale, C. quercuum and C. strobilinum have different Quercus spp. as their telial hosts. C. orientale and C. quercuum also infect Castanea spp. and Castanopsis spp. The pathogens could enter the EU via host plants for planting and cut flowers and branches. Non-EU Cronartium spp. could establish in the EU, as climatic conditions are favourable to many of them and Pinus and Quercus spp. are common. The pathogens would be able to spread following establishment by movement of host plants, as well as natural spread. Should non-EU Cronartium spp. be introduced in the EU, impacts can be expected on pine, oak and chestnut woodlands, plantations, ornamental trees and nurseries. The Cronartium species present in North America cause important tree diseases. Symptoms on Pinus spp. differ between Cronartium spp., but include galls, cankers, dieback of branches and stems, deformity, tree and cone death. The main knowledge gap concerns the limited available information on (sub)tropical Cronartium spp. The criteria assessed by the Panel for consideration of Cronartium spp. (non-EU) as potential quarantine pests are met, while, for regulated non-quarantine pests, the criterion on the pest presence in the EU is not met.
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Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of the Ralstonia solanacearum species complex (RSSC), a distinguishable cosmopolitan group of bacterial plant pathogens (including R. solanacearum, Ralstonia pseudosolanacearum and two subspecies of Ralstonia syzygii) of the family Burkholderiaceae. The RSSC causes bacterial wilt in solanaceous crops, such as potato, tomato and pepper, but can also cause wilts in other important food crops such as fruit banana, plantain banana and cassava. The pest survives in the soil, and a number of weed species can also be infected by the pest, often asymptomatically. The RSSC is regulated in Council Directive 2000/29/EC (Annex IAII) (indicated by its former name R. solanacearum, as delimited by Yabuuchi et al.) as a harmful organism whose introduction into the EU is banned. In addition, Council Directive 1998/57/EC (amended by Commission Directive 2006/63/CE) concerns the measures to be taken within EU Member States (MS) against the RSSC to (a) detect it and determine its distribution, (b) prevent its occurrence and spread, and (c) control it with the aim of eradication. The pest is present in several EU MS, but in all cases with a restricted distribution and under official control. New phylotypes of the RSSC could enter the EU primarily via host plants for planting (including seed tubers). The pest could establish in the EU, as climatic conditions are favourable, hosts are common and the pathogen has high adaptability. Spread is mainly via plants for planting. Substantial crop losses in the EU would occur in the presence of RSSC epidemics. The RSSC is regarded as one of the world's most important phytopathogenic bacteria due to its broad geographical distribution, large host range, aggressiveness, genetic diversity and long persistence in soil and water. The list of hosts and commodities for which the pest is regulated is incomplete due to the high diversity of hosts and the lack of knowledge of the complete host range. Moreover, the comparative epidemiology of the different pathogen species has not yet been studied. The criteria assessed by the Panel for consideration of the RSSC as potential quarantine pest are met, while, for regulated non-quarantine pests, the criterion on the widespread presence in the EU is not met.
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Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of Guignardia laricina , a well-de fi ned and distinguishable fungal species of the family Phyllostictaceae. The pathogen is regulated in Council Directive 2000/29/EC (Annex IAI) as a harmful organism whose introduction into the EU is banned. G. laricina is native to East Asia and causes a shoot blight disease of Larix spp. Major hosts of G. laricina are European larch ( Larix decidua ) and two North American larch species ( Larix laricina (tamarack) and Larix occidentalis (Western larch)). Larix kaempferi (Japanese larch) is reported as susceptible. The only other host in nature is Douglas fi r ( Pseudotsuga menziesii) , which is reported as an incidental host, but various other conifers have been reported as susceptible following arti fi cial inoculation, including Picea abies . The fungus is not known to occur in the EU but could enter via plants for planting (including arti fi cially dwarfed plants) and cut branches of Larix spp. It could establish in the EU, as hosts are present and climatic conditions are favourable. The pathogen would be able to spread following establishment by natural dissemination of ascospores and pycnospores and by human movement of infected plants for planting. Should the pathogen be introduced in the EU, impacts can be expected in larch forests, plantations and nurseries, leading to reduced tree growth and ecosystem service provision. The key uncertainties concern the current distribution and level of impacts in the native range of the pathogen. The criteria assessed by the Panel for consideration as a potential quarantine pest are met. As the pest is not present in the EU, not all criteria for consideration as a regulated non-quarantine pest are met.
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Following a request from the European Commission, the EFSA Plant Health Panel performed a pest categorisation of Melampsora medusae, a well-defined and distinguishable fungal species of the family Melampsoraceae. The pathogen is regulated in Annex IAI of Council Directive 2000/29/EC as a harmful organism whose introduction into the EU is banned. M. medusae is a heteroecious rust fungus with Populus spp. as primary telial hosts and various conifers (Larix, Pinus, Pseudotsuga, Abies, Picea and Tsuga spp.) as secondary aecial hosts. M. medusae is native to North America and has spread to South America, Africa, Asia, Oceania, as well as the EU, where M. medusae f. sp. deltoidae has been reported with a restricted distribution and low impacts from Belgium, south-west France and southern Portugal. The pest could spread to other EU countries, via dissemination of spores, movement of host plants for planting and cut branches. Climate is assumed not to be a limiting factor for the establishment of the pathogen in the EU. M. medusae is the most widespread and important Melampsora rust in North America. In western Canada, extensive damage has been reported to conifers and Populus spp. in nurseries and plantations as well as in woodlands. M. medusae is damaging in both Australia and New Zealand. The pest could have economic and environmental impacts in the EU if aggressive isolates of M. medusae were introduced into the EU. Import prohibition of host plants for planting is an available measure to reduce the risk of further introductions. Some resistant Populus cultivars are available. Moreover, increasing the genetic diversity of poplar plantations can prevent disease impacts. The main uncertainty concerns the factors explaining the low pathogenicity of the populations of M. medusae present in the EU. The criteria assessed by the Panel for consideration as a potential quarantine pest are met (the pest is present, but with a restricted distribution, and is officially under control). Given that plants for planting are not the main pathway of spread, not all criteria for consideration as a regulated non-quarantine pest are met.
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Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of Melampsora farlowii, a well-defined and distinguishable fungus of the family Melampsoraceae. M. farlowii is the causal agent of a leaf and twig rust of hemlocks (Tsuga spp.) in eastern North America. The pathogen is regulated in Council Directive 2000/29/EC (Annex IAI) as a harmful organism whose introduction into the EU is banned. M. farlowii is not reported to be present in Europe and could enter the EU via host plants for planting and cut branches. Cones and fruits are listed as plant parts that can carry the pest in trade and transport, but are not regulated. The pathogen could establish in the EU, as climatic conditions are favourable and Tsuga spp. have been planted as ornamentals and in plantations in several EU countries. M. farlowii would be able to spread following establishment by human movement of host plants for planting and cut branches, as well as natural spread. Should the pathogen be introduced in the EU, impacts can be expected on Tsuga spp. plantations, ornamental trees and especially nurseries. Hemlock rust is considered a destructive rust attacking Tsuga spp., particularly Tsuga canadensis in nurseries. The main uncertainties concern whether the impact of the pathogen in plantations under European conditions could be different than observed in eastern North America, whether fruit/cones of Tsuga can be a pathway of entry, and the dissemination potential of the pathogen under European conditions. However, M. farlowii is found in North America in most of the natural distribution range of T. canadensis, suggesting little dispersal limitation of the pathogen. The criteria assessed by the Panel for consideration as a potential quarantine pest are met, whilst, for regulated non-quarantine pests, the criterion on the pest presence in the EU is not met
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Following a request from the European Commission, the EFSA Plant Health Panel performed a pest categorisation of Pantoea stewartii subsp. stewartii (hereafter P. s. subsp. stewartii). P. s. subsp. stewartii is a Gram-negative bacterium that causes Stewart's vascular wilt and leaf blight of sweet corn and maize, a disease responsible for serious crop losses throughout the world. The bacterium is endemic to the USA and is now present in Africa, North, Central and South America, Asia and Ukraine. In the EU, it is reported from Italy with a restricted distribution and under eradication. The bacterium is regulated according to Council Directive 2000/29/EC (Annex IIAI) as a harmful organism whose introduction and spread in the EU is banned on seeds of Zea mays. Other reported potential host plants include various species of the family Poaceae, including weeds, rice (Oryza sativa), oat (Avena sativa) and common wheat (Triticum aestivum), as well as jackfruit (Artocarpus heterophyllus), the ornamental Dracaena sanderiana and the palm Bactris gasipaes, but there is uncertainty about whether these are hosts of P. s. subsp. stewartii or of the other subspecies. The pest could enter the EU via host plants for planting (including seed) and via insect vectors from neighbouring countries. Host plants are widely distributed and climatic conditions are conducive in the EU. P. s. subsp. stewartii could spread by movement of host plants for planting (including seeds) and insect vectors. Impacts could occur on maize and rice. Methods to certify pest freedom of maize seeds are available. The main knowledge gaps concern the availability of vectors in the EU, the level of susceptibility of the maize cultivars grown in the EU, the virulence of strains in recent outbreaks, and the host range of the bacterium. The criteria assessed by the Panel for consideration as a potential quarantine pest are met.
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Following a request from the European Commission, the EFSA Plant Health Panel performed a pest categorisation of Pantoea stewartii subsp. stewartii (hereafter P. s. subsp. stewartii). P. s. subsp. stewartii is a Gram‐negative bacterium that causes Stewart's vascular wilt and leaf blight of sweet corn and maize, a disease responsible for serious crop losses throughout the world. The bacterium is endemic to the USA and is now present in Africa, North, Central and South America, Asia and Ukraine. In the EU, it is reported from Italy with a restricted distribution and under eradication. The bacterium is regulated according to Council Directive 2000/29/EC (Annex IIAI) as a harmful organism whose introduction and spread in the EU is banned on seeds of Zea mays. Other reported potential host plants include various species of the family Poaceae, including weeds, rice (Oryza sativa), oat (Avena sativa) and common wheat (Triticum aestivum), as well as jackfruit (Artocarpus heterophyllus), the ornamental Dracaena sanderiana and the palm Bactris gasipaes, but there is uncertainty about whether these are hosts of P. s. subsp. stewartii or of the other subspecies. The pest could enter the EU via host plants for planting (including seed) and via insect vectors from neighbouring countries. Host plants are widely distributed and climatic conditions are conducive in the EU. P. s. subsp. stewartii could spread by movement of host plants for planting (including seeds) and insect vectors. Impacts could occur on maize and rice. Methods to certify pest freedom of maize seeds are available. The main knowledge gaps concern the availability of vectors in the EU, the level of susceptibility of the maize cultivars grown in the EU, the virulence of strains in recent outbreaks, and the host range of the bacterium. The criteria assessed by the Panel for consideration as a potential quarantine pest are met.
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Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of Cronartium harknessii, Cronartium kurilense and Cronartium sahoanum, which are well-defined and distinguishable tree fungal pathogens of the family Cronartiaceae. In 2018, these species were moved from the genus Endocronartium to the genus Cronartium. These pathogens are not known to be present in the EU and are regulated in Council Directive 2000/29/EC (Annex IAI) (as non-European Endocronartium spp.) as harmful organisms whose introduction into the EU is banned. These three fungi are autoecious rusts completing their life cycle on Pinus spp. C. harknessii is known as the western gall rust or pine-pine gall rust in North America (Canada, the USA and Mexico). C. kurilense and C. sahoanum are reported from Russia (North Kuril Islands) and Japan. The pathogens could enter the EU via host plants for planting and cut branches. The pathogens could establish in the EU, as climatic conditions are favourable and Pinus spp. are common. The pathogens would be able to spread following establishment by movement of host plants for planting and cut branches, as well as natural spread. Should these pathogens be introduced in the EU, impacts can be expected on pine forests, plantations, ornamental trees and nurseries. The pathogens cause formation of stem galls, which kill young trees and result in stem defect in older trees. The main knowledge gap concerns the limited available information on C. kurilense and C. sahoanum compared to C. harknessii. The criteria assessed by the Panel for consideration of C. harknessii, C. kurilense and C. sahoanum as potential quarantine pests are met, whilst, for regulated non-quarantine pests, the criterion on the pest presence in the EU is not met.
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